The detailed information of tRNA gene sequence


Sequence ID>WENV170317207
Genome IDCESP01128573
Search identical group
Phylum/Class[CESP] marine metagenome genome assembly TARA_099_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2213
End posion on genome 2137
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaactttat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGGCGGTTCAAA
TCCGCCCCCCGCAACCA
Downstream region at tRNA end position 
atctatttat
Secondary structure (Cloverleaf model)
>WENV170317207	Met	CAT
                   t      ACCA atctatttat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C G C C     A
      T G A        G      | | | | |     A
    C       C G A G       G G C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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