The detailed information of tRNA gene sequence


Sequence ID>WENV170317712
Genome IDCESP01196914
Search identical group
Phylum/Class[CESP] marine metagenome genome assembly TARA_099_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 54
End posion on genome 144
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagacaattt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTATACGTTTATAGCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aattcgaaga
Secondary structure (Cloverleaf model)
>WENV170317712	Ser	GGA
                   t      GCCA aattcgaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TATACGTTTATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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