The detailed information of tRNA gene sequence


Sequence ID>WENV170318349
Genome IDCESQ01035136
Search identical group
Phylum/Class[CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 381
End posion on genome 290
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagtggataa
tRNA gene sequence 
GGAAGAGTGGGTGAGAGGTTTAAACCAACGGGTTGCTAACTCGTCATAGGATGTAAATCT
TATCAAGGGTTCGAATCCCTTCTCTTCCGCCA
Downstream region at tRNA end position 
cttttttcct
Secondary structure (Cloverleaf model)
>WENV170318349	Ser	GCT
                   a      GCCA cttttttcct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      A G A        G      | | | | |     G
    G       G T G G       A A G G G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CATAGGATGTAAATCTTATC
                    A - T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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