The detailed information of tRNA gene sequence


Sequence ID>WENV170318519
Genome IDCESQ01053241
Search identical group
Phylum/Class[CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1193
End posion on genome 1118
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atcacagatt
tRNA gene sequence 
GGGGGTATAGTATAGCCCGGTATTATTACCGGCTCCAGACCGGTGGAGGGGGGTTCAAAT
CCCTCTGCCCCCACCA
Downstream region at tRNA end position 
taaaactcat
Secondary structure (Cloverleaf model)
>WENV170318519	Trp	CCA
                   t      ACCA taaaactcat
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    C       T A T G       G G G G G     C
    C         | | +                 T T
    G       T T A T
      G T A        T     GGAG
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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