The detailed information of tRNA gene sequence


Sequence ID>WENV170319423
Genome IDCESQ01153692
Search identical group
Phylum/Class[CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 277
End posion on genome 203
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctttattta
tRNA gene sequence 
GGGCCCATAGCTCAATTGGTTAGAGCAACGGACTCATAATCCGCAGGTTCGGGGTTCAAG
TCCCTGTGGGCCCACat
Downstream region at tRNA end position 
atgagcagtc
Secondary structure (Cloverleaf model)
>WENV170319423	Met	CAT
                   a      ACat atgagcagtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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