The detailed information of tRNA gene sequence


Sequence ID>WENV170320272
Genome IDCESQ01281581
Search identical group
Phylum/Class[CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 158
End posion on genome 86
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttctaaaata
tRNA gene sequence 
TTTGGGTTTAATTTAGCGGCAAAATCTAAAATTTCAAATTTTATTTCATAGGTTCAAATC
CTATAGCCCATGGtcg
Downstream region at tRNA end position 
ctgatttttg
Secondary structure (Cloverleaf model)
>WENV170320272	SeC	TCA
                   a      Gtcg ctgatttttg
                     T + G
                     T   T
                     T - A
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A          T A
                    T     T A T C C     A
        G A        A      | | | | |     A
      C     T T T A       A T A G G     C
      G     | | | |                 T T
      G     A A A T
        C A        C     TTTC
                    T - A
                    A - T
                    A - T
                    A - T
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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