The detailed information of tRNA gene sequence


Sequence ID>WENV170321410
Genome IDCESR01051492
Search identical group
Phylum/Class[CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 384
End posion on genome 295
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccgcttgct
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAGGCGCACGCCTGGAAAGCGTGATTACTTGAAAAGGTA
ACGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttattccgtg
Secondary structure (Cloverleaf model)
>WENV170321410	Ser	GGA
                   t      GCCA ttattccgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     ATTACTTGAAAAGGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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