The detailed information of tRNA gene sequence


Sequence ID>WENV170322205
Genome IDCESR01120783
Search identical group
Phylum/Class[CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 623
End posion on genome 533
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cttttctttt
tRNA gene sequence 
GGAGAGATGGCAGAGCCTGGTTGAATGCGCCGCACTCGAAATGCGGTATATCCTTAGGAT
ATCGGGGGTTCGAATCCCTCTCTCTCCGCTA
Downstream region at tRNA end position 
aaaaataatt
Secondary structure (Cloverleaf model)
>WENV170322205	Ser	CGA
                   t      GCTA aaaaataatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        G     TATATCCTTAGGATATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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