The detailed information of tRNA gene sequence


Sequence ID>WENV170323285
Genome IDCESR01322659
Search identical group
Phylum/Class[CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 631
End posion on genome 723
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcactaccgc
tRNA gene sequence 
GGAGGGGTCGCATAGAGGCCTAGTGCGCCGGTTTGCTAAACCGGTAAGGGGTGTATAACC
CCTTCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
ctttttcacg
Secondary structure (Cloverleaf model)
>WENV170323285	Ser	GCT
                   c      GCCA ctttttcacg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAAGGGGTGTATAACCCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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