The detailed information of tRNA gene sequence


Sequence ID>WENV170324811
Genome IDCESS01133134
Search identical group
Phylum/Class[CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 27
End posion on genome 125
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgcctttaac
tRNA gene sequence 
GGAGACGGATGCGTCACTGGTGGGCGCCCCGGACTTCAAACCCGCGTGTATGGCTCTAAA
ACAGTCATTGGTAGGTTCGATTCCTACTCGTCTCCGCCA
Downstream region at tRNA end position 
ataaacaaac
Secondary structure (Cloverleaf model)
>WENV170324811	SeC	TCA
                   c      GCCA ataaacaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C
                     G + T          T T
                    A     C A T C C     A
      C A C        T      | | | | |     G
    T       T G C G       G T A G G     C
    G       + | | |                 T T
    G       G C G C
      T G G        C     GTGTATGGCTCTAAAACAGTCATTG
                    C   C
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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