The detailed information of tRNA gene sequence


Sequence ID>WENV170325217
Genome IDCEST01003692
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1663
End posion on genome 1591
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttaattagag
tRNA gene sequence 
AGGTGTATAGCTCAATTGGCAGAGCGTGACTCTCCAAAAGTTGAAGTTAGGGGTTCAAGT
CCTCTTACACCTGaat
Downstream region at tRNA end position 
gataaaaata
Secondary structure (Cloverleaf model)
>WENV170325217	Trp	CCA
                   g      Gaat gataaaaata
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     A - T          T G
                    T     T C T C C     A
      T A A        A      | | + | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AAGTT
                    T + G
                    G + T
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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