The detailed information of tRNA gene sequence


Sequence ID>WENV170325263
Genome IDCEST01007406
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3403
End posion on genome 3329
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaacttaa
tRNA gene sequence 
TGCGGAATAGAGCAGTTCGGTAGCTCGTCAGGCTCATAACTTGAAAGTCATAGGTTCAAA
TCCTATTTCCGCAACgt
Downstream region at tRNA end position 
tgaagtatag
Secondary structure (Cloverleaf model)
>WENV170325263	Met	CAT
                   a      ACgt tgaagtatag
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T A T C C     A
      T G A        A      | | | | |     A
    T       C G A G       A T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AAGTC
                    T - A
                    C - G
                    A - T
                    G + T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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