The detailed information of tRNA gene sequence


Sequence ID>WENV170325440
Genome IDCEST01019706
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3211
End posion on genome 3297
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atatgtaatT
tRNA gene sequence 
TTATGTGTGGTCGAGTGGTTTATGACGTTAGATTGCTAATCTATTAAATCTGAAGATTTC
ATAGGTTCGAATCCTATCACTTAAAAta
Downstream region at tRNA end position 
tgtttttata
Secondary structure (Cloverleaf model)
>WENV170325440	Ser	GCT
                   T      AAta tgtttttata
                     T - A
                     T - A
                     A - T
                     T   T
                     G - C
                     T - A
                     G - C          T A
                    T     T A T C C     A
      T G A        G      | | | | |     G
    G       G C T G       A T A G G     C
    G       + | | |                 T T
    T       T G A C
      T T A        G     TAAATCTGAAGATTTC
                    T   T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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