The detailed information of tRNA gene sequence


Sequence ID>WENV170325559
Genome IDCEST01032182
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 7376
End posion on genome 7449
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcacccctA
tRNA gene sequence 
GGGGGCGTAGTTTAGAGGTTAGAACAAGGTGCTCATTCCACCTTAACCTGGGTTCGAATC
CCAGTGTCCCCTAtc
Downstream region at tRNA end position 
cgcttagatt
Secondary structure (Cloverleaf model)
>WENV170325559	Met	CAT
                   A      TAtc cgcttagatt
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G + T          T A
                    T     G A C C C     A
      A G A        A      | | | | |     G
    G       T T T G       C T G G G     C
    G       + | | |                 T T
    T       G A A C
      T A          A     TAAC
                    A - T
                    G - C
                    G - C
                    T - A
                    G - C
                  C       C
                  T       T
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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