The detailed information of tRNA gene sequence


Sequence ID>WENV170325572
Genome IDCEST01032818
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 22920
End posion on genome 22847
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ataccctttt
tRNA gene sequence 
GGCTAAATAACATAACAGGTTAATGTAAGAGATTGCAAATCTCTAAATGATAGTTCAAGT
CTGTCTTTAGCTTCtt
Downstream region at tRNA end position 
attgatttat
Secondary structure (Cloverleaf model)
>WENV170325572	Cys	GCA
                   t      TCtt attgatttat
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T
                     A - T
                     A - T          T G
                    T     C T G T C     A
      C A A        A      | | + | |     A
    A       T A C A       G A T A G     C
    G       | | | |                 T T
    G       A T G T
      T T A        A     AAAT
                    A - T
                    G - C
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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