The detailed information of tRNA gene sequence


Sequence ID>WENV170325663
Genome IDCEST01038828
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4228
End posion on genome 4301
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatctcagtT
tRNA gene sequence 
CGTAAAGTTTAGCAATGGTTGCTTAATAATCTCATCAGTTATATCATAAAGGTTCGAATC
CTTTCTTTACAAAtt
Downstream region at tRNA end position 
taaaaaannn
Secondary structure (Cloverleaf model)
>WENV170325663	Met	CAT
                   T      AAtt taaaaaannn
                     C   A
                     G - C
                     T - A
                     A - T
                     A - T
                     A - T
                     G - C          T A
                    T     T T T C C     A
        A A        T      | | | | |     G
      T     C G A T       A A A G G     C
      G     | | |                   T T
      G     G C T T
        T T        A     ATCAT
                    A - T
                    T - A
                    A - T
                    A - T
                    T + G
                  C       A
                  T       C
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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