The detailed information of tRNA gene sequence


Sequence ID>WENV170325758
Genome IDCEST01052462
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 11821
End posion on genome 11751
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
actaaaaaca
tRNA gene sequence 
AGGAGCATAGTTTAATGGTAGAACAATGGTCTTCAAAACCATATGCGTAGGTTCGATTCC
TGCTGTTCCTGttt
Downstream region at tRNA end position 
gattcgtctt
Secondary structure (Cloverleaf model)
>WENV170325758	SeC	TCA
                   a      Gttt gattcgtctt
                     A - T
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     A - T          T T
                    T     C G T C C     A
        A A        A      | + | | |     G
      T     T T T G       G T A G G     C
      G     + | | |                 T T
      G     G A A C
        T A        A     ATGC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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