The detailed information of tRNA gene sequence


Sequence ID>WENV170325778
Genome IDCEST01054879
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 365
End posion on genome 294
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gttaaactcg
tRNA gene sequence 
TTTTTCTTCGTCTAAGGGTTAGGATAGGGTTTTTTCAATACCCAGATAAAGGTTCAAATC
CTTTAGAAAAGAaag
Downstream region at tRNA end position 
aatgtggcga
Secondary structure (Cloverleaf model)
>WENV170325778	Glu	TTC
                   g      Aaag aatgtggcga
                     T + G
                     T - A
                     T - A
                     T - A
                     T - A
                     C - G
                     T - A          T A
                    T     T T T C C     A
      G A A        C      | | | | |     A
    G       T C T G       A A A G G     C
    G       + | | +                 T T
    T       G G A T
      T A          A     AGAT
                    G - C
                    G - C
                    G - C
                    T - A
                    T   T
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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