The detailed information of tRNA gene sequence


Sequence ID>WENV170325904
Genome IDCEST01071002
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 345
End posion on genome 256
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
actcattaac
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCAAAGGGGCAACTCTT
TCCTGAGTTCGAATCTCAGTCTCTCCGCCA
Downstream region at tRNA end position 
ttactcaatc
Secondary structure (Cloverleaf model)
>WENV170325904	Ser	TGA
                   c      GCCA ttactcaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       C T G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAAGGGGCAACTCTTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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