The detailed information of tRNA gene sequence


Sequence ID>WENV170325909
Genome IDCEST01071577
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 342
End posion on genome 253
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgggagagat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAGGCTCACGCTTGGAAAGTGTGTGTACTGTTAAAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCTCCA
Downstream region at tRNA end position 
aaattgaaaa
Secondary structure (Cloverleaf model)
>WENV170325909	Ser	GGA
                   t      TCCA aaattgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        T     TGTACTGTTAAAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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