The detailed information of tRNA gene sequence


Sequence ID>WENV170325915
Genome IDCEST01072213
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1817
End posion on genome 1730
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatttctatc
tRNA gene sequence 
GGAAAGGTGGCTGAGTGGTCGAAGGCGATTCGTTGCTAATGAATTGAGCGGTATTCCCGT
TCCGCAGGTTCGAATCCTGTCCTTTCCTgaa
Downstream region at tRNA end position 
aaggttattt
Secondary structure (Cloverleaf model)
>WENV170325915	Ser	GCT
                   c      Tgaa aaggttattt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         + | |                 T T
    T       A G G C
      C G A        G     TGAGCGGTATTCCCGTTCC
                    A - T
                    T - A
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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