The detailed information of tRNA gene sequence


Sequence ID>WENV170325931
Genome IDCEST01074798
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5933
End posion on genome 6005
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttactggccc
tRNA gene sequence 
GGATTTATAGCTCAGTTGGTAGAGCGAAGAACTCATACTTCTTTTGTCGTGGGTTCAAAT
CCTACTAGGTCCTaat
Downstream region at tRNA end position 
aggtttcggg
Secondary structure (Cloverleaf model)
>WENV170325931	Met	CAT
                   c      Taat aggtttcggg
                     G - C
                     G - C
                     A - T
                     T + G
                     T + G
                     T - A
                     A - T          T A
                    T     C A T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TTGTC
                    A - T
                    A - T
                    G - C
                    A - T
                    A - T
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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