The detailed information of tRNA gene sequence


Sequence ID>WENV170325953
Genome IDCEST01077906
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1652
End posion on genome 1725
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atacgcagaA
tRNA gene sequence 
GACAAAATAGCTTAAATGGTAGAGCTTCGGATTCATACTTCGAGGGTAGGAGTTCAATTC
TCCTTTTTGTCTAta
Downstream region at tRNA end position 
aggtttcgta
Secondary structure (Cloverleaf model)
>WENV170325953	Met	CAT
                   A      TAta aggtttcgta
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     A - T
                     A - T          T T
                    T     T C C T C     A
      A A A        A      | | | | |     A
    T       T T C G       A G G A G     C
    G       + | | |                 T T
    G       G A G C
      T A          T     GGGT
                    T - A
                    C - G
                    G - C
                    G + T
                    A - T
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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