The detailed information of tRNA gene sequence


Sequence ID>WENV170325990
Genome IDCEST01081533
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 582
End posion on genome 493
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataagttaac
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGTGCATGCTTGGAAAGTATGTGTACTGTTAAAAGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
atattattta
Secondary structure (Cloverleaf model)
>WENV170325990	Ser	GGA
                   c      GCCA atattattta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | +                 T T
    T       A G G T
      T T A        G     TGTACTGTTAAAAGTACC
                    C - G
                    A - T
                    T - A
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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