The detailed information of tRNA gene sequence


Sequence ID>WENV170326106
Genome IDCEST01090800
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 375
End posion on genome 448
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gttaggaaaa
tRNA gene sequence 
TAGAGAATAGTTTAGTTGGTTAGAACGTTAGTCTTCAAAATTAAAGGCCGGGGGTTCGAA
TCCCTCTTCTCTTGaaa
Downstream region at tRNA end position 
atagttgaac
Secondary structure (Cloverleaf model)
>WENV170326106	SeC	TCA
                   a      Gaaa atagttgaac
                     T   T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       T T T G       G G G G G     C
    G       + | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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