The detailed information of tRNA gene sequence


Sequence ID>WENV170326169
Genome IDCEST01133853
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 22
End posion on genome 107
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taatataaaa
tRNA gene sequence 
GGGAAGGTGGCTGAGTGGTTAAGGCATTGGTTTGCTAAACCAACGCGTTTTTATACGCAC
CGTGGGTTCGAATCCCGCCCTTTCCGtat
Downstream region at tRNA end position 
tttatttttc
Secondary structure (Cloverleaf model)
>WENV170326169	Ser	GCT
                   a      Gtat tttatttttc
                     G - C
                     G - C
                     G + T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T A          A     CGCGTTTTTATACGCACC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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