The detailed information of tRNA gene sequence


Sequence ID>WENV170326213
Genome IDCEST01151868
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 312
End posion on genome 241
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttattttata
tRNA gene sequence 
GAGGGGATAGTTTATCTGGTAAAATACTAGTTTCCAAAACTGGTGTGGGGGGTTCAAGTC
CCTCTTCCCTTGttt
Downstream region at tRNA end position 
tccatttttt
Secondary structure (Cloverleaf model)
>WENV170326213	Trp	CCA
                   a      Gttt tccatttttt
                     G + T
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T          T G
                    T     C T C C C     A
      C T A        A      | + | | |     A
    T       T T T G       G G G G G     C
    G       | | | +                 T T
    G       A A A T
      T A          A     TGTG
                    C - G
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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