The detailed information of tRNA gene sequence


Sequence ID>WENV170326218
Genome IDCEST01153158
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 317
End posion on genome 246
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acctataaca
tRNA gene sequence 
GATCTCATCTTCTAATGGTTAGGAAATGGCCCTTTCTAGGCTGGAATCGGGGTTCAAATC
CCCGTGGGATTAgcg
Downstream region at tRNA end position 
cgaagcgcga
Secondary structure (Cloverleaf model)
>WENV170326218	Glu	TTC
                   a      Agcg cgaagcgcga
                     G + T
                     A - T
                     T - A
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    T     G C C C C     A
      T A A        C      | | | | |     A
    G       T C T T       C G G G G     C
    G       + | | |                 T T
    T       G G A A
      T A          A     GAAT
                    T + G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       T
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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