The detailed information of tRNA gene sequence


Sequence ID>WENV170326232
Genome IDCEST01155885
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 655
End posion on genome 727
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatttttaa
tRNA gene sequence 
GGGCTTATAGTTTAGTTGGTAAAACAGGCCCCTCATAAGGGTTAGAGCGTAGGTTCAAGT
CCTACTAAGCCCAttt
Downstream region at tRNA end position 
tgataagatt
Secondary structure (Cloverleaf model)
>WENV170326232	Met	CAT
                   a      Attt tgataagatt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       T T T G       G T A G G     C
    G       | | | |                 T T
    G       A A A C
      T A          A     AGAGC
                    G + T
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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