The detailed information of tRNA gene sequence


Sequence ID>WENV170326285
Genome IDCEST01169706
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1190
End posion on genome 1118
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gatttatgat
tRNA gene sequence 
AATTAAGTAACATAATTGGCTAATGTAATTGATTGCAAATCATTTAAAAAGGGTTCAAAT
CCCTTCTTAATTTaat
Downstream region at tRNA end position 
aatgcatttt
Secondary structure (Cloverleaf model)
>WENV170326285	Cys	GCA
                   t      Taat aatgcatttt
                     A - T
                     A - T
                     T - A
                     T - A
                     A - T
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T A A        A      | | | | |     A
    T       T A C A       A A G G G     C
    G       | | | |                 T T
    G       A T G T
      C T A        A     TAAA
                    A - T
                    T   T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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