The detailed information of tRNA gene sequence


Sequence ID>WENV170326365
Genome IDCEST01179777
Search identical group
Phylum/Class[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2445
End posion on genome 2372
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagataagta
tRNA gene sequence 
AACGATATAATTCAGTTGGTTAGAATGTTGGAATCATAACCCAAATGTCAAAGGTTCAAG
TCCTTTTATCGTTAaaa
Downstream region at tRNA end position 
ttacgggtag
Secondary structure (Cloverleaf model)
>WENV170326365	Met	CAT
                   a      Aaaa ttacgggtag
                     A - T
                     A - T
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     T T T C C     A
      T G A        A      | | | | |     A
    T       C T T A       A A A G G     C
    G       | | | |                 T T
    G       G A A T
      T T A        G     ATGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    A   C
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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