The detailed information of tRNA gene sequence


Sequence ID>WENV170326531
Genome IDCESU01006413
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4674
End posion on genome 4600
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cacactatct
tRNA gene sequence 
CAAAAGTTTAGTTTAACGGTTAAAATATTGGATTTCAAATTCAAGGATTAAAGGTTCGAT
TCCTTTAACTTTTGGaat
Downstream region at tRNA end position 
tcttttattt
Secondary structure (Cloverleaf model)
>WENV170326531	SeC	TCA
                   t      Gaat tcttttattt
                     C - G
                     A - T
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A
                     T - A          T T
                    T     T T T C C     A
      C A A        A      | | | | |     G
    G       T T T G       A A A G G     C
    G       | | | +                 T T
    T       A A A T
      T A          A     GGATT
                    T - A
                    T - A
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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