The detailed information of tRNA gene sequence


Sequence ID>WENV170327020
Genome IDCESU01038578
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1266
End posion on genome 1190
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacaacacag
tRNA gene sequence 
GGGCCTGTAGCTTAGTAGGTTAGAGCGCCCGGCTCATAACCGGGAGGTCAGGGGTTCAAC
TCCCTTCGGGCCCACCA
Downstream region at tRNA end position 
tttaatttct
Secondary structure (Cloverleaf model)
>WENV170327020	Met	CAT
                   g      ACCA tttaatttct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T C
                    T     T T C C C     A
      T G A        A      | + | | |     A
    A       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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