The detailed information of tRNA gene sequence


Sequence ID>WENV170327407
Genome IDCESU01076968
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2317
End posion on genome 2244
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actacataga
tRNA gene sequence 
AGCGGGGTAGAGCAGTCTGGTAGCTTGTAAGGCTCATAATCTTAAGGTCATAGGTTCGAA
TCCTGTCCCCGCCAttt
Downstream region at tRNA end position 
ttgtttagtg
Secondary structure (Cloverleaf model)
>WENV170327407	Met	CAT
                   a      Attt ttgtttagtg
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | + | | |     G
    C       C G A G       A T A G G     C
    T       | | | +                 T T
    G       G C T T
      G T A        G     AGGTC
                    T - A
                    A - T
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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