The detailed information of tRNA gene sequence


Sequence ID>WENV170327428
Genome IDCESU01077918
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 216
End posion on genome 292
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
catcacaagt
tRNA gene sequence 
CGGGGCGTGGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGAAGGTTCAAA
TCCTTTCGCCCCGACCA
Downstream region at tRNA end position 
ttttattatg
Secondary structure (Cloverleaf model)
>WENV170327428	Pro	TGG
                   t      ACCA ttttattatg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T T C C     A
      C G A        G      + | | | |     A
    C       C G C G       G A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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