The detailed information of tRNA gene sequence


Sequence ID>WENV170328109
Genome IDCESU01199773
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 612
End posion on genome 687
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cttttttatT
tRNA gene sequence 
TAAAGTGTTGTGTAACACGGTAGCACACTGGTTTTGGGAATCAGAAAGTGTAGGTTCAAA
TCCTACCACTTTAAAaa
Downstream region at tRNA end position 
tttaaattga
Secondary structure (Cloverleaf model)
>WENV170328109	Pro	TGG
                   T      AAaa tttaaattga
                     T - A
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C A T C C     A
      C A A        T      | | | | |     A
    A       T G T G       G T A G G     C
    C       + | | |                 T T
    G       G C A C
      G T A        A     AAAGT
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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