The detailed information of tRNA gene sequence


Sequence ID>WENV170328254
Genome IDCESU01225365
Search identical group
Phylum/Class[CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3
End posion on genome 92
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnat
tRNA gene sequence 
GGATAAGTGGTCGAGTGGTTTAAGGCGCCAGTTTTGAAAACTGGTGTGTATTAGTGTATA
CCGTGGGTTCGAATCCCTCCTTATCTTTCA
Downstream region at tRNA end position 
ttttaatttt
Secondary structure (Cloverleaf model)
>WENV170328254	Ser	TGA
                   t      TTCA ttttaatttt
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      |   | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        G     TGTGTATTAGTGTATACC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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