The detailed information of tRNA gene sequence


Sequence ID>WENV170329271
Genome IDCESV01094476
Search identical group
Phylum/Class[CESV] marine metagenome genome assembly TARA_100_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5977
End posion on genome 6050
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tagggtaaac
tRNA gene sequence 
GCATGAGTGGTCTAGGTGGTGATGACGTTCGCTTTACACGCGAAAGGTCATGGGTTCGAA
TCCCATCTCGTGTAtaa
Downstream region at tRNA end position 
ttagtattat
Secondary structure (Cloverleaf model)
>WENV170329271	Val	TAC
                   c      Ataa ttagtattat
                     G + T
                     C - G
                     A - T
                     T + G
                     G - C
                     A - T
                     G - C          T A
                    T     T A C C C     A
      G G A        G      | | | | |     G
    T       T C T G       A T G G G     C
    G         | | |                 T T
    G       T G A C
      T G A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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