The detailed information of tRNA gene sequence


Sequence ID>WENV170330421
Genome IDCESV01268603
Search identical group
Phylum/Class[CESV] marine metagenome genome assembly TARA_100_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 349
End posion on genome 260
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttgtattaa
tRNA gene sequence 
GGAGAGTTGGCAGAGTGGTTGAATGCACTAGTCTTGAAAACTAGCATAGATGCAAGTCTA
TCGAGAGTTCGAATCTCTCACTCTCCGCCA
Downstream region at tRNA end position 
aaatattaaa
Secondary structure (Cloverleaf model)
>WENV170330421	Ser	TGA
                   a      GCCA aaatattaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CATAGATGCAAGTCTATC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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