The detailed information of tRNA gene sequence


Sequence ID>WENV170332525
Genome IDCESW01201278
Search identical group
Phylum/Class[CESW] marine metagenome genome assembly TARA_096_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 629
End posion on genome 533
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
GGAGGCGTCACGTTGCCCGGTGGTGCGCCCGGTCTTCAAAACCGGAGAGGGGTATTTTGA
TGCTCCTGGTGGGTTCGACTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
aacaaactaa
Secondary structure (Cloverleaf model)
>WENV170332525	SeC(p)	TCA
                   t      GCCA aacaaactaa
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    C     C A C C C     A
      C C G        A      | | | | |     G
    C       T T G C       G T G G G     C
    G         + | |                 T T
    G       T G C G
      T G G        C     AGAGGGGTATTTTGATGCTCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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