The detailed information of tRNA gene sequence


Sequence ID>WENV170333645
Genome IDCESY01071978
Search identical group
Phylum/Class[CESY] marine metagenome genome assembly TARA_098_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 216
End posion on genome 290
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cggggcagtt
tRNA gene sequence 
GGGCGCTTAACTCAGCGGTAGAGTGCCATCTTCACACGGTGGAAGTCACAGGTTCAAATC
CTGTAGCGCCCACCA
Downstream region at tRNA end position 
tttccattac
Secondary structure (Cloverleaf model)
>WENV170333645	Val	CAC
                   t      ACCA tttccattac
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C A       A C A G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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