The detailed information of tRNA gene sequence


Sequence ID>WENV170334826
Genome IDCESZ01010457
Search identical group
Phylum/Class[CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 549
End posion on genome 621
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtctaattaa
tRNA gene sequence 
GCGCTCTTAGTTCAGTTGGTAGAACGTAGGTTTCCAAAACCTGATGTCGAGGGTTCAAGT
CCTTCAGGGCGTGatt
Downstream region at tRNA end position 
ttatggaggg
Secondary structure (Cloverleaf model)
>WENV170334826	Trp	CCA
                   a      Gatt ttatggaggg
                     G + T
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T + G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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