The detailed information of tRNA gene sequence


Sequence ID>WENV170335705
Genome IDCESZ01090999
Search identical group
Phylum/Class[CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 99
End posion on genome 171
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccaatttta
tRNA gene sequence 
AACGTAATAGCTCAATTGGTAGAGTACCGGAATCATAATCCGTCTGTTGTGGGTTCAAGT
CCCACTTTCGTTAttt
Downstream region at tRNA end position 
tatttttata
Secondary structure (Cloverleaf model)
>WENV170335705	Met	CAT
                   a      Attt tatttttata
                     A - T
                     A - T
                     C - G
                     G - C
                     T   T
                     A - T
                     A - T          T G
                    T     C A C C C     A
      T A A        A      | | | | |     A
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     CTGTT
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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