The detailed information of tRNA gene sequence


Sequence ID>WENV170335873
Genome IDCESZ01105685
Search identical group
Phylum/Class[CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1317
End posion on genome 1241
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgccttgat
tRNA gene sequence 
TGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCTACCA
Downstream region at tRNA end position 
attcccatcg
Secondary structure (Cloverleaf model)
>WENV170335873	Met	CAT
                   t      ACCA attcccatcg
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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