The detailed information of tRNA gene sequence


Sequence ID>WENV170336527
Genome IDCETA01017452
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 339
End posion on genome 254
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccttaccctt
tRNA gene sequence 
GGGAGGATGCTAGAATGGTAATAGGACTGATTGCTATTCAGTTGTCAATTTATGACTTGT
TGGTTCGAATCCAACTCCTTCCGCTA
Downstream region at tRNA end position 
ttctttttta
Secondary structure (Cloverleaf model)
>WENV170336527	Ser	GCT
                   t      GCTA ttctttttta
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C A A C C     A
        A A        G      | | | | |     G
      T     G A T C       G T T G G     C
      G       | | |                 T T
      G     A T A G
        T A        G     TGTCAATTTATGACTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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