The detailed information of tRNA gene sequence


Sequence ID>WENV170336591
Genome IDCETA01022967
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1132
End posion on genome 1042
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgatgatcag
tRNA gene sequence 
GGAGAGTTGCCAGAGCGGACGAATGGGCTCGCTTGGAAAGCGTGTGAGGTCTAACCGGCC
TCCGTGGGTTCGAATCCCACACTCTCCGCCA
Downstream region at tRNA end position 
tgaacgacaa
Secondary structure (Cloverleaf model)
>WENV170336591	Ser	GGA
                   g      GCCA tgaacgacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGAGGTCTAACCGGCCTCC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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