The detailed information of tRNA gene sequence


Sequence ID>WENV170336734
Genome IDCETA01033135
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 819
End posion on genome 728
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttttattat
tRNA gene sequence 
GCACAGGTGGCAGAATTGGTTATGCGCGGGATTGCAAATCCCGTTAAGCCCTTATTTTAG
GGATGTGGGTTCGAGTCCCATCCTGTGCTCCA
Downstream region at tRNA end position 
ttttaaacta
Secondary structure (Cloverleaf model)
>WENV170336734	Cys	GCA
                   t      TCCA ttttaaacta
                     G - C
                     C - G
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T A C C C     A
      T A A        G      + | | | |     G
    T       G A C G       G T G G G     C
    G         | | |                 T T
    G       A T G C
      T T          G     TTAAGCCCTTATTTTAGGGAT
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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