The detailed information of tRNA gene sequence


Sequence ID>WENV170336867
Genome IDCETA01046231
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 239
End posion on genome 165
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtaaggttaA
tRNA gene sequence 
TGCGGGTTAGTGTAAATGGTCAACACATTTGACTCATGATCAAAATATAAAGGTTCAAAT
CCTTTATCCGCTTAtt
Downstream region at tRNA end position 
gtataaggaa
Secondary structure (Cloverleaf model)
>WENV170336867	Met	CAT
                   A      TAtt gtataaggaa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A          T A
                    T     T T T C C     A
      A A A        A      | | | | |     A
    T       T G T G       A A A G G     C
    G       | | | |                 T T
    G       A C A C
      T C A        A     ATAT
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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