The detailed information of tRNA gene sequence


Sequence ID>WENV170337039
Genome IDCETA01060808
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1558
End posion on genome 1634
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tgcctgtccc
tRNA gene sequence 
GGGCGCGTAGCTCAGCTGGCTAGAGCACCTCCCTTACAAGGAGGGGGTCGGGGGTTCAAG
TCCCTCCGCGCCCACCA
Downstream region at tRNA end position 
ggaaacacac
Secondary structure (Cloverleaf model)
>WENV170337039	Val	TAC
                   c      ACCA ggaaacacac
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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