The detailed information of tRNA gene sequence


Sequence ID>WENV170337398
Genome IDCETA01108944
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 257
End posion on genome 183
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ttgccgttgt
tRNA gene sequence 
GCCAGGGTAGCTCAGCCTGGGAGAGCACTCGGCTGAAGACCGAGCTGTCGCGCGTTCAAG
TCCCGCCTCTGGCACtt
Downstream region at tRNA end position 
atattattta
Secondary structure (Cloverleaf model)
>WENV170337398	Phe	GAA
                   t      ACtt atattattta
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C          T G
                    T     C G C C C     A
      C G A        A      | | |   |     A
    C       C T C G       G C G C G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     CTGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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